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RE: cannot start the transform script. reason : "argument list too long"

Subject: RE: cannot start the transform script. reason : "argument list too long"
Date: Tue, 1 Mar 2011 14:53:36 -0800
Looks like this is the command line it was executing:
2011-03-01 14:46:13,733 INFO org.apache.hadoop.hive.ql.exec.ScriptOperator: 
Executing [/usr/bin/python2.6, user_id_output.py, hbase]
From: Irfan Mohammed [mailto:[email protected]]
Sent: Tuesday, March 01, 2011 1:39 PM
To: [email protected]
Subject: Re: cannot start the transform script. reason : "argument list too 
long"
Thanks Ajo.
The hive sql and the python script run fine with a dataset of ( < 10M ) 
records. It is only when running with a large dataset of ( > 100M ) records, 
that I run into this error. I have been trying to get to the number of records 
(10-100M) or the invalid data which is causing the error.
I am trying to get to the actual error from the UnixProcess instantiation.
On Tue, Mar 1, 2011 at 1:23 PM, Ajo Fod 
<[email protected]<mailto:[email protected]>> 
wrote:
instead of
using 'python2.6 user_id_output.py hbase'
try something like this:
using 'user_id_output.py'
... and a #! line with the location of the python binary.
I think you can include a parameter too in the call like :
using 'user_id_output.py hbase'
Cheers,
Ajo.
On Tue, Mar 1, 2011 at 8:22 AM, Irfan Mohammed 
<irfan.ma<http://irfan.ma>@gmail.com<http://gmail.com>> wrote:
Hi,
I have a hive script [given below] which calls a python script using transform 
and for large datasets [ > 100M rows ], the reducer is not able to start the 
python process and the error message is "argument list too long". The detailed 
error stack is given below.
The python script takes only 1 static argument "hbase". For small datasets [ 1M 
rows ], the script works fine.
 1.  Is this problem related to the number of open file handles on the reducer 
box?
 2.  How do I get the correct error message?
 3.  Is there a way to get to the actual unix process with arguments it is 
instantiating?
Thanks,
Irfan
>>>>>>>>>>>>>> script >>>>>>>>>>>>>>>>>>>>>>>>>>>
true && echo "
set hive.exec.compress.output=true;
set io.seqfile.compression.type=BLOCK;
set mapred.output.compression.type=BLOCK;
set mapred.output.compression.codec=org.apache.hadoop.io.compress.GzipCodec;
set hive.merge.mapfiles=false;
set hive.exec.dynamic.partition=true;
set hive.exec.dynamic.partition.mode=nonstrict;
set hive.exec.max.dynamic.partitions=20000;
set hive.map.aggr=true;
set mapred.reduce.tasks=200;
add file /home/irfan/scripts/user_id_output.py;
from (
  select
    user_id,
    source_id,
    load_id,
    user_id_json,
    pid
  from
    user_id_bucket
  where
        1 = 1
    and length(user_id) = 40
  distribute by pid
  sort by user_id, load_id desc
) T1
insert overwrite table user_id_hbase_stg1 partition (pid)
SELECT
  transform
  (
      T1.user_id
    , T1.source_id
    , T1.load_id
    , T1.user_id_json
    , T1.pid
  )
  using 'python2.6 user_id_output.py hbase'
  as user_id, user_id_info1, user_id_info2, user_id_info3, user_id_info4, 
user_id_info5, user_id_info3, pid
;
" > ${SQL_FILE};
true && ${HHIVE} -f ${SQL_FILE} 1>${TXT_FILE} 2>${LOG_FILE};
>>>>>>>>>>>>>> error log >>>>>>>>>>>>>>>>>>>>>>>>>
2011-03-01 14:46:13,705 INFO org.apache.hadoop.hive.ql.exec.ExtractOperator: 
Initializing Self 5 OP
2011-03-01 14:46:13,711 INFO org.apache.hadoop.hive.ql.exec.ExtractOperator: 
Operator 5 OP initialized
2011-03-01 14:46:13,711 INFO org.apache.hadoop.hive.ql.exec.ExtractOperator: 
Initializing children of 5 OP
2011-03-01 14:46:13,711 INFO org.apache.hadoop.hive.ql.exec.SelectOperator: 
Initializing child 6 SEL
2011-03-01 14:46:13,711 INFO org.apache.hadoop.hive.ql.exec.SelectOperator: 
Initializing Self 6 SEL
2011-03-01 14:46:13,711 INFO org.apache.hadoop.hive.ql.exec.SelectOperator: 
SELECT struct<_col0:string,_col1:string,_col2:string,_col3:string,_col4:string>
2011-03-01 14:46:13,711 INFO org.apache.hadoop.hive.ql.exec.SelectOperator: 
Operator 6 SEL initialized
2011-03-01 14:46:13,711 INFO org.apache.hadoop.hive.ql.exec.SelectOperator: 
Initializing children of 6 SEL
2011-03-01 14:46:13,711 INFO org.apache.hadoop.hive.ql.exec.ScriptOperator: 
Initializing child 7 SCR
2011-03-01 14:46:13,711 INFO org.apache.hadoop.hive.ql.exec.ScriptOperator: 
Initializing Self 7 SCR
2011-03-01 14:46:13,728 INFO org.apache.hadoop.hive.ql.exec.ScriptOperator: 
Operator 7 SCR initialized
2011-03-01 14:46:13,728 INFO org.apache.hadoop.hive.ql.exec.ScriptOperator: 
Initializing children of 7 SCR
2011-03-01 14:46:13,728 INFO org.apache.hadoop.hive.ql.exec.FileSinkOperator: 
Initializing child 8 FS
2011-03-01 14:46:13,728 INFO org.apache.hadoop.hive.ql.exec.FileSinkOperator: 
Initializing Self 8 FS
2011-03-01 14:46:13,730 INFO org.apache.hadoop.hive.ql.exec.FileSinkOperator: 
Operator 8 FS initialized
2011-03-01 14:46:13,730 INFO org.apache.hadoop.hive.ql.exec.FileSinkOperator: 
Initialization Done 8 FS
2011-03-01 14:46:13,730 INFO org.apache.hadoop.hive.ql.exec.ScriptOperator: 
Initialization Done 7 SCR
2011-03-01 14:46:13,730 INFO org.apache.hadoop.hive.ql.exec.SelectOperator: 
Initialization Done 6 SEL
2011-03-01 14:46:13,730 INFO org.apache.hadoop.hive.ql.exec.ExtractOperator: 
Initialization Done 5 OP
2011-03-01 14:46:13,733 INFO ExecReducer: ExecReducer: processing 1 rows: used 
memory = 89690888
2011-03-01 14:46:13,733 INFO org.apache.hadoop.hive.ql.exec.ExtractOperator: 5 
forwarding 1 rows
2011-03-01 14:46:13,733 INFO org.apache.hadoop.hive.ql.exec.SelectOperator: 6 
forwarding 1 rows
2011-03-01 14:46:13,733 INFO org.apache.hadoop.hive.ql.exec.ScriptOperator: 
Executing [/usr/bin/python2.6, user_id_output.py, hbase]
2011-03-01 14:46:13,733 INFO org.apache.hadoop.hive.ql.exec.ScriptOperator: 
tablename=null
2011-03-01 14:46:13,733 INFO org.apache.hadoop.hive.ql.exec.ScriptOperator: 
partname=null
2011-03-01 14:46:13,733 INFO org.apache.hadoop.hive.ql.exec.ScriptOperator: 
alias=null
2011-03-01 14:46:13,777 FATAL ExecReducer: 
org.apache.hadoop.hive.ql.metadata.HiveException: Hive Runtime Error while 
processing row (tag=0) 
{"key":{"reducesinkkey0":"AA11223344","reducesinkkey1":"20110210_02"},"value":{"_col0":"xxxxx","_col1":"m1","_col2":"20110210_02","_col3":"{'m07':
 'x12', 'm02': 'x34', 'm01': 'm45'}","_col4":"0A9"},"alias":0}
at org.apache.hadoop.hive.ql.exec.ExecReducer.reduce(ExecReducer.java:253)
at org.apache.hadoop.mapred.ReduceTask.runOldReducer(ReduceTask.java:467)
at org.apache.hadoop.mapred.ReduceTask.run(ReduceTask.java:415)
at org.apache.hadoop.mapred.Child$4.run(Child.java:217)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:396)
at 
org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1063)
at org.apache.hadoop.mapred.Child.main(Child.java:211)
Caused by: org.apache.hadoop.hive.ql.metadata.HiveException: Cannot initialize 
ScriptOperator
at 
org.apache.hadoop.hive.ql.exec.ScriptOperator.processOp(ScriptOperator.java:320)
at org.apache.hadoop.hive.ql.exec.Operator.process(Operator.java:457)
at org.apache.hadoop.hive.ql.exec.Operator.forward(Operator.java:697)
at 
org.apache.hadoop.hive.ql.exec.SelectOperator.processOp(SelectOperator.java:84)
at org.apache.hadoop.hive.ql.exec.Operator.process(Operator.java:457)
at org.apache.hadoop.hive.ql.exec.Operator.forward(Operator.java:697)
at 
org.apache.hadoop.hive.ql.exec.ExtractOperator.processOp(ExtractOperator.java:45)
at org.apache.hadoop.hive.ql.exec.Operator.process(Operator.java:457)
at org.apache.hadoop.hive.ql.exec.ExecReducer.reduce(ExecReducer.java:244)
... 7 more
Caused by: java.io.IOException: Cannot run program "/usr/bin/python2.6": 
java.io.IOException: error=7, Argument list too long
at java.lang.ProcessBuilder.start(ProcessBuilder.java:459)
at 
org.apache.hadoop.hive.ql.exec.ScriptOperator.processOp(ScriptOperator.java:279)
... 15 more
Caused by: java.io.IOException: java.io.IOException: error=7, Argument list too 
long
at java.lang.UNIXProcess.<init>(UNIXProcess.java:148)
at java.lang.ProcessImpl.start(ProcessImpl.java:65)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:452)
... 16 more
2011-03-01 14:46:13,779 WARN org.apache.hadoop.mapred.Child: Error running child
java.lang.RuntimeException: org.apache.hadoop.hive.ql.metadata.HiveException: 
Hive Runtime Error while processing row (tag=0) 
{"key":{"reducesinkkey0":"AA11223344","reducesinkkey1":"20110210_02"},"value":{"_col0":"xxxxx","_col1":"m1","_col2":"20110210_02","_col3":"{'m07':
 'x12', 'm02': 'x34', 'm01': 'm45'}","_col4":"0A9"},"alias":0}
at org.apache.hadoop.hive.ql.exec.ExecReducer.reduce(ExecReducer.java:265)
at org.apache.hadoop.mapred.ReduceTask.runOldReducer(ReduceTask.java:467)
at org.apache.hadoop.mapred.ReduceTask.run(ReduceTask.java:415)
at org.apache.hadoop.mapred.Child$4.run(Child.java:217)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:396)
at 
org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1063)
at org.apache.hadoop.mapred.Child.main(Child.java:211)
Caused by: org.apache.hadoop.hive.ql.metadata.HiveException: Hive Runtime Error 
while processing row (tag=0) 
{"key":{"reducesinkkey0":"AA11223344","reducesinkkey1":"20110210_02"},"value":{"_col0":"xxxxx","_col1":"m1","_col2":"20110210_02","_col3":"{'m07':
 'x12', 'm02': 'x34', 'm01': 'm45'}","_col4":"0A9"},"alias":0}
at org.apache.hadoop.hive.ql.exec.ExecReducer.reduce(ExecReducer.java:253)
... 7 more
Caused by: org.apache.hadoop.hive.ql.metadata.HiveException: Cannot initialize 
ScriptOperator
at 
org.apache.hadoop.hive.ql.exec.ScriptOperator.processOp(ScriptOperator.java:320)
at org.apache.hadoop.hive.ql.exec.Operator.process(Operator.java:457)
at org.apache.hadoop.hive.ql.exec.Operator.forward(Operator.java:697)
at 
org.apache.hadoop.hive.ql.exec.SelectOperator.processOp(SelectOperator.java:84)
at org.apache.hadoop.hive.ql.exec.Operator.process(Operator.java:457)
at org.apache.hadoop.hive.ql.exec.Operator.forward(Operator.java:697)
at 
org.apache.hadoop.hive.ql.exec.ExtractOperator.processOp(ExtractOperator.java:45)
at org.apache.hadoop.hive.ql.exec.Operator.process(Operator.java:457)
at org.apache.hadoop.hive.ql.exec.ExecReducer.reduce(ExecReducer.java:244)
... 7 more
Caused by: java.io.IOException: Cannot run program "/usr/bin/python2.6": 
java.io.IOException: error=7, Argument list too long
at java.lang.ProcessBuilder.start(ProcessBuilder.java:459)
at 
org.apache.hadoop.hive.ql.exec.ScriptOperator.processOp(ScriptOperator.java:279)
... 15 more
Caused by: java.io.IOException: java.io.IOException: error=7, Argument list too 
long
at java.lang.UNIXProcess.<init>(UNIXProcess.java:148)
at java.lang.ProcessImpl.start(ProcessImpl.java:65)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:452)
... 16 more
2011-03-01 14:46:13,784 INFO org.apache.hadoop.mapred.Task: Runnning cleanup 
for the task
msgmiddle
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